2018
Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum
Kim W, Miguel-Rojas C, Wang J, Townsend JP, Trail F. Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum. MBio 2018, 9: 10.1128/mbio.01292-18. PMID: 30108170, PMCID: PMC6094484, DOI: 10.1128/mbio.01292-18.Peer-Reviewed Original ResearchConceptsSmall RNA clustersSubset of lncRNAsRole of lncRNAsBody formationRNA clustersAntisense lncRNAsSexual developmentDevelopmental stage-specific expression patternsStage-specific expression patternsVegetative growthNonsense-mediated decay pathwayFundamental genomic resourcesMeiotic stagesHundreds of lncRNAsSense-antisense pairsGenome-wide analysisRNA surveillance systemLong Noncoding RNA ExpressionPlant pathogenic fungiNoncoding RNA ExpressionKey regulatory componentOpposite DNA strandsFruiting-body formationMajor staple cropDevelopmental transcriptomeDynamics and Function of Nuclear Bodies during Embryogenesis
Escayola D, Neugebauer K. Dynamics and Function of Nuclear Bodies during Embryogenesis. Biochemistry 2018, 57: 2462-2469. PMID: 29473743, DOI: 10.1021/acs.biochem.7b01262.Peer-Reviewed Original ResearchConceptsNuclear bodiesCajal bodiesRNA processingZygotic gene productsRNA-protein complexesEfficient RNA processingFunction of nucleoliNuclear body formationGene elementsVariety of organismsZygotic genomeZygotic transitionGenomic lociNascent RNAModel organismsNuclear stepsTranscriptional activationEarly embryosNuclear proteinsGene productsGene locusMembraneless organellesBody formationExcellent modelCell nuclei
2015
Coilin: The first 25 years
Machyna M, Neugebauer KM, Staněk D. Coilin: The first 25 years. RNA Biology 2015, 12: 590-596. PMID: 25970135, PMCID: PMC4615369, DOI: 10.1080/15476286.2015.1034923.Peer-Reviewed Original Research
2007
Comparative Analysis of the Developmental Competence of Three Human Embryonic Stem Cell Lines in Vitro
Kim S, Kim B, Gil J, Kim S, Kim J. Comparative Analysis of the Developmental Competence of Three Human Embryonic Stem Cell Lines in Vitro. Molecules And Cells 2007, 23: 49-56. PMID: 17464211, DOI: 10.1016/s1016-8478(23)07388-0.Peer-Reviewed Original ResearchConceptsHuman embryonic stem cellsHESC linesHuman embryonic stem cell linesEmbryonic stem cell linesPrimordial germ cellsDevelopmental potentialEmbryonic stem cellsEmbryonic germ layersEmbryoid body formationSpecific cell typesDevelopmental competenceStem cell linesCell replacement therapyExtraembryonic tissuesStem cell technologyGerm layersTerminal differentiationGerm cellsBody formationPluripotency markersCell typesNeuronal cellsTelomerase activityStem cellsHSF6
2004
The Plasmodium falciparum Vps4 homolog mediates multivesicular body formation
Yang M, Coppens I, Wormsley S, Baevova P, Hoppe H, Joiner K. The Plasmodium falciparum Vps4 homolog mediates multivesicular body formation. Journal Of Cell Science 2004, 117: 3831-3838. PMID: 15252121, DOI: 10.1242/jcs.01237.Peer-Reviewed Original ResearchMeSH KeywordsAdenosine TriphosphatasesAdenosine TriphosphateAnimalsCell ProliferationCholesterolCloning, MolecularCOS CellsCytoplasmCytosolDNAElectroporationEndosomal Sorting Complexes Required for TransportEndosomesFibroblastsGreen Fluorescent ProteinsHumansHydrolysisImmunoblottingLipoproteins, LDLMicroscopy, ElectronMutationPhylogenyPlasmodium falciparumProtein Structure, TertiaryProtozoan ProteinsSubcellular FractionsToxoplasmaTransfectionTransgenesConceptsMultivesicular bodiesCOS cellsRelated parasite Toxoplasma gondiiUnique secretory organellesClass E genesMultivesicular body formationEndosomal multivesicular bodiesHost cell invasionLarge vesicular structuresPlasmodium falciparum homologP. falciparumVps4 functionEndosomal intermediatesApicomplexan familyPhylogenetic boundariesATP bindingSecretory organellesEarly endosomesParasite Toxoplasma gondiiP. falciparum trophozoitesATP hydrolysisInternal membranesT. gondiiBody formationCell invasion
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